Application of response surface methodology in medium optimization for pyruvic acid production of Torulopsis glabrata TP19 in batch fermentation

Application of response surface methodology in medium optimization for pyruvic acid production of Torulopsis glabrata TP19 in batch fermentation first-author †E-mail:zj96sk@163.com †E-mail:zj96sk@163.com zj96sk@163.com Tianjin Key Lab of Industrial Microbiology, College of Biotechnology, Tianjin University of Science and Technology, Tianjin 300457, China Tianjin Key Lab of Industrial Microbiology, College of Biotechnology, Tianjin University of Science and Technology, Tianjin 300457, China Response surface methodology (RSM) was used to optimize the fermentation medium for enhancing pyruvic acid production by Torulopsis glabrata TP19. In the first step of optimization, with Plackett-Burman design, ammonium sulfate, glucose and nicotinic acid were found to be the important factors affecting pyruvic acid production significantly. In the second step, a 2 3 full factorial central composite design and RSM were applied to determine the optimal concentration of each significant variable. A second-order polynomial was determined by the multiple regression analysis of the experimental data. The optimum values for the critical components were obtained as follows: ammonium sulfate 0.7498 (10.75 g/L), glucose 0.9383 (109.38 g/L) and nicotinic acid 0.3633 (7.86 mg/L) with a predicted value of maximum pyruvic acid production of 42.2 g/L. Under the optimal conditions, the practical pyruvic acid production was 42.4 g/L. The determination coefficient ( R 2 ) was 0.9483, which ensures adequate credibility of the model. By scaling up fermentation from flask to jar fermentor, we obtained promising results. Response surface methodology Torulopsis glabrata Pyruvic acid Fermentation Medium optimization INTRODUCTION 1 Pyruvic acid, also known as 2-oxopropanoic acid, α-ketopropionic acid or acetylformic acid, is the most important α-oxocarboxylic acid. It plays a central role in energy metabolism in living organisms. Industrially, it is used mainly as a starting material in the biosynthesis of pharmaceuticals, such as L-tryptophan, L-tyrosine, L-dihydroxyphenylalanine (Uchio et al., 1976 1976 ), L-phenylacetylcarbinol (Rosche et al., 2002 2002 ), and N-acetyl-D-neuraminic acid (Mahmoudian et al., 1997 1997 ). It is also employed in the production of crop protection agents, antioxidant, polymers, cosmetics and food additives. Calcium pyruvate also has a strong effect in reducing fat because it can accelerate the metabolism of fatty acids in the human body (Roufs, 1996 1996 ), and presently it serves as a fat burner in the food industry. As it is widely used in drug, agrochemical, chemical and food industries, the commercial demand for pyruvic acid has been expanding (Yonehara and Miyata, 1994 1994 ). Basically, there are four different known approaches to produce pyruvic acid: (1) chemical synthesis and oxidation (Tsujino et al., 1992 1992 ; Ai and Ohdan, 1995 1995 ), (2) enzymes (Burdick and Schaeffer, 1987 1987 ; Eisenberg et al., 1997 1997 ), (3) resting cells (Izumi et al., 1982 1982 ; Schinschel and Simon, 1993 1993 ; Ogawa et al., 2001 2001 ), and (4) fermentation processes (Yokota et al., 1994 1994 ; Li et al., 2001a 2001a ; 2001b 2001b ; Causey et al., 2004 2004 ). In comparison with these approaches, the fermentation processes is regarded as one of the most promising routes for the production of pyruvic acid. Recent research efforts have focused on further process development (optimization) and scale-up of pyruvic acid production. As we all known, medium components play a very important role in enhancing the pyruvic acid accumulation, therefore, medium optimization study is very important. In general, medium optimization by the traditional ‘one-factor-at-a-time’ technique was used (Gokhade et al., 1991 1991 ). This method is not only laborious and time consuming but also often leads to an incomplete understanding of the system behaviour, resulting in confusion and a lack of predictive ability. Response surface methodology (RSM) is a powerful and efficient mathematical approach widely applied in the optimization of fermentation process, e.g. media components on enzyme production (Adinarayana and Ellaiah, 2002 2002 ; Park et al., 2002 2002 ; Puri et al., 2002 2002 ), production of other metabolites (Zhang et al., 1996 1996 ; Sunitha et al., 1998 1998 ; Sadhukhan et al., 1999 1999 ; Hujanen et al., 2001 2001 ), spore production (Yu et al., 1997 1997 ) and biomass production optimization (Lhomme and Roux, 1991 1991 ). It can give information about the interaction between variables, provide information necessary for design and process optimization, and give multiple responses at the same time. In this study, optimization of fermentation media of Torulopsis glabrata TP19 was investigated using RSM to increase the pyruvic acid production. In the first optimization step, a Plackett-Burman (PB) design was used to determine the likely effects of medium components on pyruvic acid production. In the second step, the factors that had significant effects were optimized using a central composite design (CCD) and response surface analysis. Based on optimal medium, scale-up was carried out in a 5-L jar fermentor. MATERIALS AND METHODS 1 Microorganism 2 Torulopsis glabrata TG-06 wild type was obtained from Tianjin Key Lab of Industrial Microbiology, China. From this a mutation Torulopsis glabrata TP19 (NA − +Bio − +TPP − +Pdx − ), which was used as a pyruvic acid producer in this research, was developed in the authors’ laboratory. It was maintained on agar slants containing (per liter): 30 g glucose, 10 g peptone, 20 g agar, 1 g KH 2 PO 4 and 0.5 g MgSO 4 ·7H 2 O. The organism was subcultured over the interval of 2 months and stored at 4 °C. Medium 2 The seed medium consisted of (per liter): 30 g glucose, 5 ml corn steep liquor, 10 g peptone, 1 g KH 2 PO 4 and 0.5 g MgSO 4 ·7H 2 O. The components in the fermentation medium were added according to the design of each experiment. Trace element solution containing (per liter of 2 mol/L HCl): 2 g CaCl 2 ·2H 2 O, 2 g FeSO 4 ·7H 2 O, 5 g ZnCl 2 , 0.2 g MnCl 2 ·4H 2 O and 0.5 g CuSO 4 ·5H 2 O. The initial pH of all media was adjusted to 5.0. In the fermentor, the pH was automatically controlled at 5.0 with 8 mol/L NaOH solution. All vitamins were sterilized by microfiltration; and CaCO 3 was sterilized by dry-heat sterilization at 160 °C for 30 min before being added to the medium. Cultivation 2 A loopful of cells from the slant were transferred into a 250-ml conical flask containing 30-ml seed medium and incubated for 20 h on a rotary shaker operating at 200 r/min at 30 °C. It was then inoculated either into a 500-ml flask containing 50 ml fermentation medium or into a 5-L jar fermentor (Biostat M.B. Braun Co., Germany) containing 3 L fermentation medium. The inoculum size was 10% (v/v). In shake flask culture, it was incubated on a rotary shaker operating at 200 r/min at 30 °C. In fermentor culture, it was incubated at 30 °C, the agitation speed was controlled at 400 r/min. The air flow rate was 1.2 L/min. Foam formation was prevented by adding sterile polypropylene glycol solution (10% aqueous PPG 2000). Sample preparation 2 After 60 h, fermentation broth was collected. The cells were removed by centrifugation at 12000 r/min for 10 min, the supernatant was collected and further diluted by a factor of 100 with Milli-Q water. This diluent was then filtered through a 0.45 μm millipore filter prior to injection into the chromatographic column. HPLC 2 Pyruvic acid concentration was measured by HPLC (agilent 1100 series) using a Bio-Rad HPX-87H Aminex column 7.8 mm×300 mm and a UV detector at 210 nm with 0.005 mol/L H 2 SO 4 as the eluent at a flow rate of 0.6 ml/min at 55 °C. Experimental designs and data analysis 2 1. Plackett-Burman (PB) design 3 PB design, a very useful tool, was used to screen ‘ n ’ variables in just ‘ n +1’ number of experiments (Plackett and Burman, 1946 1946 ; Rama et al., 1999 1999 ; Ghanem et al., 2000 2000 ). There will be a tremendous decrease in total experiments. In this part, the PB design was used to evaluate the relative importance of various nutrients for pyruvic acid production in batch fermentation. This design does not consider the interaction effects among the variables and is used to screen the important variables affecting the pyruvic acid production. The experimental design for screening of medium components is shown in Tables 1 1 and 2 2 . Each variable was set at two levels, that is, high level and low level. The high level of each variable was set far enough from the low level to identify which ingredients of the media have significant influence on the pyruvic acid production. Trace element solution was constantly maintained at 5 ml/L. The design matrix (Table 2 2 ) was developed using an SAS package, version 8.01. 2 2 Variables 2 Levels Low (−1) High (+1) A Glucose (g/L) 80 100 B Ammonium sulfate (g/L) 8 10 C KH 2 PO 4 (g/L) 1.0 1.5 D MgSO 4 ·7H 2 O (g/L) 0.5 1.5 E Nicotinic acid (mg/L) 6.0 7.5 F Thiamine·HCl (µg/L) 20 25 G Biotin (µg/L) 10 15 H Pyridoxine·HCl (mg/L) 0.4 0.6 2 Run 8 Variables 2 Pyruvic acid yield (g/L) A B C D E F G H 1 1 −1 1 −1 −1 −1 1 1 32.5 2 1 1 −1 1 −1 −1 −1 1 36.3 3 −1 1 1 −1 1 −1 −1 −1 36.9 4 1 −1 1 1 −1 1 −1 −1 35.0 5 1 1 −1 1 1 −1 1 −1 38.5 6 1 1 1 −1 1 1 −1 1 40.2 7 −1 1 1 1 −1 1 1 −1 36.8 8 −1 −1 1 1 1 −1 1 1 33.4 9 −1 −1 −1 1 1 1 −1 1 32.6 10 1 −1 −1 −1 1 1 1 −1 35.3 11 −1 1 −1 −1 −1 1 1 1 34.1 12 −1 −1 −1 −1 −1 −1 −1 −1 31.8 2. Central composite design (CCD) 3 CCD is one of the response surface methodologies (Chakravarti and Sahai, 2002 2002 ). After the identification of the components affecting the pyruvic acid yield significantly, a CCD was adopted to optimize the major variables (ammonium sulfate, glucose and nicotinic acid), which were selected through PB design. Coded levels for independent variables are presented in Table 3 3 . X 1 =( x 1 −10)/1; X 2 =( x 2 −100)/10; X 3 =( x 3 −7.5)/1 2 Variables 5 Coded levels −1.682 −1 0 1 1.682 Ammonium sulfate, X 1 8.3 9.0 10.0 11.0 11.7 Glucose, X 2 83.2 90.0 100.0 110.0 116.8 Nicotinic acid, X 3 5.8 6.5 7.5 8.5 9.2 For statistical calculations the variables X i were coded as x i according to Eq.( 1 1 ) X i =( x i − x 0 )/Δ x i , i =1, 2, 3, …, K , where X i is (dimensionless) coded value of the real variable x i , x 0 is the real value of X i at the center point (zero) level, and the Δ x i is the step change value. A 2 3 -factorial CCD, with six axial points ( a =1.682) and six replications at the centre points ( n 0 =6) leading to a total number of 20 experiments was employed (Table 4 4 ) for the optimization of the three chosen medium variables. Pyruvic acid yield ( Y , g/L) was used as the dependent output variable. 2 Run 3 Factor 2 Pyruvic acid yield, Y (g/L) X 1 X 2 X 3 1 −1 −1 −1 37.9 2 −1 −1 1 38.2 3 −1 1 −1 39.8 4 −1 1 1 40.5 5 1 −1 −1 39.3 6 1 −1 1 40.0 7 1 1 −1 40.2 8 1 1 1 41.7 9 −1.682 0 0 39.8 10 1.682 0 0 41.8 11 0 −1.682 0 38.2 12 0 1.682 0 42.4 13 0 0 −1.682 39.5 14 0 0 1.682 39.8 15 0 0 0 41.3 16 0 0 0 41.2 17 0 0 0 41.5 18 0 0 0 41.6 19 0 0 0 41.4 20 0 0 0 41.4 Second degree polynomials, Eq.( 2 2 ), which includes all interaction terms, were used to calculate the predicted response. $$Y = \beta _0 + \sum {\beta _i X_i } + \sum {\beta _{ii} X_i^2 } + \sum {\beta _{ij} X_i X_j } ,$$ where Y represents response variable, β 0 is the interception coefficient, β i , coefficient of the linear effect, β ii , the coefficient of quadratic effect and β ij , the coefficient of interaction effect. The experiments were performed in duplicate with the mean values taken for analysis. An SAS package, version 8.01, was used for multiple regression analysis of the experimental data obtained. F -test was employed to evaluate the statistical significance of the quadratic polynomial. The multiple coefficients of correlation R and the determination coefficient of correlation R 2 were calculated to evaluate the performance of the regression equation. The optimum levels of the selected variables were obtained by solving the regression equation using a multi-stage Monte-Carlo optimization (Conley, 1984 1984 ) program and also by analysing the response-surface plots (Khuri and Cornell, 1987 1987 ). RESULTS AND DISCUSSION 1 Plackett-Burman (PB) design 2 The first optimization step was using a 12-run PB design to identify the significant factors for pyruvic acid production by Torulopsis glabrata TP19. According to the resulting effects of these eight variables on pyruvic acid concentration and the associated significant levels presented in Table 5 5 , it can be seen that with the increase in the concentration of ammonium sulfate, glucose, nicotinic acid, KH 2 PO 4 , thiamine·HCl and MgSO 4 ·7H 2 O, all have positive effects on pyruvic acid production. With increase in the pyridoxine∙HCl levels, biotin has negative effects on pyruvic acid production. With the help of relative ranking, ammonium sulfate, glucose and nicotinic acid within the tested limits were selected for further optimization, which had the most significant effects on pyruvic acid production. Statistically significant at 95% of probability level Statistically significant at 99% of probability level Code Coefficient t value P > | T | Ranking A 1.0167 4.1157 0.0260 2 * * B 1.8500 7.4893 0.0049 1 ** ** C 0.5167 2.0916 0.1276 4 D 0.1500 0.6072 0.5866 8 E 0.8667 3.5085 0.0392 3 * * F 0.3833 1.5518 0.2185 6 G −0.1833 −0.7422 0.5118 7 H −0.4333 −1.7543 0.1777 5 The positive effects of ammonium sulfate and glucose were, probably, caused by the requirement of a large quantity of substrate to synthesize cells. It is possible that the high concentration of nicotinic acid could contribute to the improvement of the glucose consumption rate. This may be due to the fact that nicotinic acid is a component of NAD, a cofactor of glycolysis (Miyata and Yonehara, 1996 1996 ), resulting in both good cell growth and satisfactory pyruvic acid production. The PB design was proved to be a powerful tool to rapidly determine the effects of medium constituents on pyruvic acid production of Torulopsis glabrata TP19. However the optimal concentrations of medium components that significantly affect pyruvic acid production could not be obtained. Further work need to be done to find out this information. Central composite design (CCD) 2 This is a very useful tool to determine the optimal level of medium constituents and their interaction. Based on the PB design, where ammonium sulfate, glucose and nicotinic acid were selected for their significant effects on the pyruvic acid production, a CCD was used for further optimization. Table 3 3 gave the variation levels at which these components were supplemented to pyruvic acid production. Other nutrients concentrations were set at their centre point tested in the PB design. Table 4 4 gives the design and results of experiments carried out by the CCD design. The results obtained were submitted to analysis of variance on SAS package, with the regression model given as $$\begin{gathered}Y = 41.416 + 0.598X_1 + 1.015X_2 + 0.27X_3 - \\{\text{ }}0.31X_1^2 - 0.2X_1 X_2 + 0.15X_1 X_3 - 0.49X_2^2 + \\{\text{ }}0.15X_2 X_3 - 0.72X_3^2 , \\\end{gathered}$$ where Y is the response value, that is, the pyruvic acid production, and X 1 , X 2 and X 3 are the coded levels of ammonium sulfate, glucose and nicotinic acid, respectively. The analysis of variance of the quadratic regression model demonstrated that Eq.( 3 3 ) was a highly significant model, as was evident from the Fisher’s F -test with a very low probability value [( P model > F )=0.0001]. The model’s goodness of fit was checked by determination coefficient ( R 2 ). In this case, the value of the determination coefficient ( R 2 =0.9483) indicated that only 5.17% of the total variations were not explained by the model. The value of the adjusted determination coefficient [Adj( R 2 )=0.9019] was also very high in supporting the high significance of the model. Among the model terms, X 1 , X 2 , X 2 2 and X 3 2 were significant with a probability of 99%; X 3 and X 1 2 were significant with a probability of 95% (Table 6 6 ). The interaction between X 1 , X 2 and X 3 , however, had no significant influence on pyruvic acid production. Statistically significant at 95% of probability level Statistically significant at 99% of probability level Term Effect SS DF F ratio P > F X 1 0.598 4.8799 1 28.6470 0.0003 ** ** X 2 1.015 14.0734 1 82.6170 0.0001 ** ** X 3 0.270 1.0049 1 5.8992 0.0355 * * X 1 2 −0.310 1.4161 1 8.3134 0.0163 * * X 1 X 2 0.200 0.3200 1 1.8786 0.2005 X 1 X 3 0.150 0.1800 1 1.0567 0.3282 X 2 2 −0.490 3.4637 1 20.3340 0.0011 ** ** X 2 X 3 0.150 0.1800 1 1.0567 0.3282 X 3 2 −0.720 7.4721 1 43.8650 0.0001 ** ** Model − 31.2741 9 20.3990 0.0001 Error − 1.7034 10 − − Total − 32.9775 19 − − The fitted response for the above regression model was plotted in Fig. 1 1 . 3D graphs were generated for the pair-wise combination of the three factors while keeping the other one at its optimum levels for pyruvic acid production. Graphs are given here to highlight the roles played by various factors and also to emphasize the roles played by the physical constraints vis-a-vis the biosynthetic aspects in the final yield of the pyruvic acid. The predicted optimum levels of the tested variables, namely, ammonium sulfate, glucose and nicotinic acid were obtained by applying regression analysis on Eq.( 3 3 ) using SAS package software, version 8.01. The optimal levels were as follows: X 1 =0.7498 (10.75 g/L), X 2 =0.9383 (109.38 g/L), X 3 =0.3633 (7.86 mg/L) with the corresponding Y =42.2 g/L. Verification of the predicted values was conducted by using optimal medium in inoculation experiments. The practical corresponding response was 42.4 g/L. This result corroborated the validity and the effectiveness of this model. In an attempt to approximate industrial conditions for pyruvic acid production, scale-up was carried out in a jar fermentor by using optimal medium. In this way, we achieved a volumetric productivity of 0.911 g pyruvate/(L·h), a pyruvate/glucose yield of 0.53 g/g, and pyruvic acid production of 54.6 g/L. These results are encouraging for optimization under pilot scale or industrial scale conditions. CONCLUSION 1 RSM was performed to optimize the medium components for pyruvic acid production of Torulopsis glabrata TP19. A highly significant quadratic polynomial obtained by the CCD was very useful for determining the optimal concentrations of constituents that have significant effects on pyruvic acid production. The optimal supplementary components (per liter) consisted of 109.38 g glucose, 10.75 g ammonium sulfate, 1.25 g KH 2 PO 4 , 1 g MgSO 4 ·7H 2 O, 7.86 mg nicotinic acid, 22.5 μg thiamine·HCl, 12.5 μg biotin, 0.5 mg pyridoxine·HCl and 5 ml trace element solution. Under the optimal condition, 42.2 g/L pyruvic acid could be produced in theory and 42.4 g/L pyruvic acid in practical experiment. 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